PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN04892.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 334aa    MW: 37537.4 Da    PI: 4.5711
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN04892.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.87.2e-12167210654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  KHN04892.1 167 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 210
                 589*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.491161210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.24E-15164221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-12167216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-9167210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.21E-4168214No hitNo description
Gene3DG3DSA:4.10.280.109.3E-15168221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048734.14E-4260301No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0032440Molecular Function2-alkenal reductase [NAD(P)] activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MELSQLGFLD ELLAPRKDTT WSNALSTGLN ELLLPSGWSF DSFDENQGLS TLNPSFAAFS  60
TPLDHRFECP YGSEAAYPFV DGFTLPELDS SYTRNDESAP LLPQEDNPSL EDEEFGFLGR  120
DNQSLEQAKI GCKIEEQVTE IPVFNMGLCG EKKPKSKKLE GQPSKNLMAE RRRRKRLNDR  180
LSMLRSIVPK ISKMDRTSIL GDTIDYMKEL LERIGKLQEE EIEEGTNQIN LLGISKELKP  240
NEVMVRNSPK FDVERRDQDT RISICCATKP GLLLSTVNTL EALGLEIHQC VISSFNDFSM  300
QASCSGAAEQ RNCMNQEEIK QALFRNAGYG GRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169176ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0310970.0KT031097.1 Glycine max clone HN_CCL_167 bHLH transcription factor (Glyma01g02390.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003517154.10.0PREDICTED: transcription factor bHLH93-like isoform X1
SwissprotQ9LSL11e-88BH093_ARATH; Transcription factor bHLH93
TrEMBLA0A0B2PBB40.0A0A0B2PBB4_GLYSO; Transcription factor bHLH93
STRINGGLYMA01G02390.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118634103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-89beta HLH protein 93
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]